Origami hummingbird in sentoku

Agent systems · models · evaluation

fieldnotes

Writing and evidence: agent systems, models, evaluation and computational biology.

View
Agent systems5 pieces Harnesses, gates, sandboxes, orchestration, and the products built on them.
Models6 pieces Adapting models to a job, and serving them on hardware I own.
Jim Carrey meme: slow is smooth and smooth is fast is just something slow people say

GLM-5.3-Flash serving · 9 October 2026

Is fast decoding the be all and end all?

Four serving recipes for GLM-5.3-Flash on two DGX Sparks. The recipe that answers fastest is not the one that generates fastest, and none of the four escapes the constraints that matter for real agent work.

Read this piece →

Evaluation12 pieces Designing a study, running it, and reporting what it did and did not show.
Jim Carrey meme: slow is smooth and smooth is fast is just something slow people say

GLM-5.3-Flash serving · 9 October 2026

Is fast decoding the be all and end all?

Four serving recipes for GLM-5.3-Flash on two DGX Sparks. The recipe that answers fastest is not the one that generates fastest, and none of the four escapes the constraints that matter for real agent work.

Read this piece →

Peak counts and overlap across eleven analysis conditions

Reproducibility audit · 9 August 2026

Circadian ChIP-seq reproducibility audit

A method reconstruction, sensitivity analysis and local ENCODE-equivalent comparison for public mouse liver circadian factor ChIP-seq. No tested condition reproduced both the deposited peak counts and the peak sets.

Read this piece →

Computational biology2 pieces Circadian genomics, phenome classification, and disease modelling.
Peak counts and overlap across eleven analysis conditions

Reproducibility audit · 9 August 2026

Circadian ChIP-seq reproducibility audit

A method reconstruction, sensitivity analysis and local ENCODE-equivalent comparison for public mouse liver circadian factor ChIP-seq. No tested condition reproduced both the deposited peak counts and the peak sets.

Read this piece →

Jim Carrey meme: slow is smooth and smooth is fast is just something slow people say

GLM-5.3-Flash serving · 9 October 2026

Is fast decoding the be all and end all?

Four serving recipes for GLM-5.3-Flash on two DGX Sparks. The recipe that answers fastest is not the one that generates fastest, and none of the four escapes the constraints that matter for real agent work.

Read this piece →

Peak counts and overlap across eleven analysis conditions

Reproducibility audit · 9 August 2026

Circadian ChIP-seq reproducibility audit

A method reconstruction, sensitivity analysis and local ENCODE-equivalent comparison for public mouse liver circadian factor ChIP-seq. No tested condition reproduced both the deposited peak counts and the peak sets.

Read this piece →